Serously, up your circulation. CO2 is a well mixed gas in the atmosphere, but in water it's rather light and as such, outgasses very quickly. If your circulation is low, or your surface agitation is high you can see half and half problems like this.
Since you only have algae on one half of your tank I have to ask, are you running a co2 reactor on the clean side and not on the other side? If so, try moving your reactor to the other side first and give it a week or two and you should see a change, probably slight.
If you move your filter intake to the other side you'll draw more water from the clean side over, however, you also run the risk of firing the BBA all over your tank and contaminating your filter media, changing the problem from localized to systemic.