. . . Bio Media is far more effective when the water is properly filtered mechanically before it enters the bio media...
When physical waste is allowed to enter the bio media the physical waste plugs the pores that give bio media value.
Allowing physical waste to collect in the bio media also means you either need to A) clean the bio media frequently and in the cleaning of bio media it is inevitable that you will remove some portion of the bacteria colonizing in it, or B) You will allow the physical waste to remain in the bio media and rot making the ammonia/nitrite/nitrate concentrations increase unnecessarily. . .