I'm not a canister user(yet) so I can't say for certain, but I'd go with the same principle, if it appears clogged, rinse it out in old tank water so you don't kill the bacteria and continue to use it until it appears to be disintegrating.
If it appears to be disintegrating, there's likely no room to put it behind, so what I would do is squeeze the old one out onto the water supply side of the new foam/filter, and seed it that way.
Canister users, feel free to step in, I'm only theoretical when it comes to canisters, and I know it.