There are also environmental factors that can cause deformities.
If pH is too high, or too low.
If water temp is off.
If nitrates are too high when the brood first hatches, and plenty of other reasons.
If any 1 or more are off when eggs are first put down, or if the parents experienced something that altered genetics in the past, there is a possibility of deformities.
About 10 years ago, a number of cichlidophilles (including me) bought Tomocichla asfraci from someone who had successfully spawned the species, we were all
ecstatic to finally get some.
As they grew, it turned out every person I talked to who bought them (encluding me)said 99% were deformed, and even those that looked OK were suspected of having screwed up genes.

I believe I bought 10 juvies, you can sort of see above some snub nose faces (kind of like BPs)
Most slowly died off, but a couple lived, and looked, just OK.

The one above was one that looked OK on the surface.
I ended up giving it to another aquarist who had mostly mutants that died, but one was "OK"
I think both ended up dying.
Just because they look outwardly OK, doesn't mean they are.
EBJDs come to mind..