The more plumbing you use at the larger size, the less friction loss you will have, meaning the pump will produce more GPH if you use larger pipe, all else being equal. So expanding to larger pipe straight from the outlet of the pump and using the largest possible until you have to reduce to a smaller size is best- doing it this way will get you the most GPH from the pump.
I'm personally not a fan of Mag pumps...they are horribly inefficient.
The Mag 18 does 1,100GPH at 5' head on 150 watts
The Laguna Max Flo 2000 does 1,440GPH @ 5' head on just 80 watts.
You get more flow on almost half the wattage with the Laguna. Not saying you should swap it out, but the amount of money you could be saving on your electric bill could make it worthwhile to get the Laguna and keep the Mag as a backup.
I don't understand the first part of what you wrote. The amount of water falling through your drains is only going to be equal to the amount of water your pump is able to push back up into your tank, right? Or are you just saying you are not happy with how much flow you are getting from your pumps?
I would consider swapping out your Mag Drive's for Lagunas...you could get more flow (which it sounds like you want) and you could reduce your electric bill....it's a win-win.
If you pay the national average for electricity, swapping the mag 18s for Max flo 2000's could save you over $130 per year and give you around 900GPH more flow (assuming ~5' head).