Lets talk Bio-media and Bio-filtration

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duanes

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There is a lot of talk about which bio-media is best.


There are also claims that one is much better than the rest.


But how would we know?


The goal of Bio-media is not to make a tank look aesthetically better, clearer, or cleaner.


Bio-media is in our tanks to support a population of bacteria that eat ammonia and nitrite. In reality basically bio-media, and its inhabitants, do nothing else. They don’t filter out particles or fish feces, that’s what mechanical media is for.


You can’t see ammonia or nitrite in the water.





The only way you will know that the population of beneficial bacteria is sufficient in your tank is if……





your fish aren’t dying,


they are healthy,


or if you use, one of the commercial tests for ammonia and/or nitrite that are available.





Clear looking, apparently clean, water can be toxic with ammonia, and turbid, brown muddy water can be healthy.


The most common tests are colorimetric chemical tests, and colorimetric comparator strips (or paper tests).


Depending on what chemical is used as a reagent (indicator) , ammonia will show up as a certain color (often times green)
fullsizeoutput_c81.jpeg

Whether one is better or worse tests is subjective.


If you use proper techniques of rinsing and measuring amounts in tubes, the liquid chem tests are great. (you are dealing with parts per million, a tiny stain on a tube, or few extra drops more or less can change everything.


If you don’t properly rinse tubes, or measure sloppily, or not abide by the proper timing and shaking, they can be inaccurate. If they are out of date, they may be inaccurate.


I rinse tubes 3 times in DI or RO water after each sample, and set them upside down to drain after use. A left over drip can leave a residual that can skew results.


Test strips are easy, you dip, wait the proper amount of minutes to read, and get a reading. They can be accurate, if well made.


If they are out of date, or compromised by dampness, they can give false results.


As a retired chemist in a water quality lab, I have found both can be accurate.





Most active ammonia and nitrite consuming bacteria are sessile, which means they live as a bio-film on objects, and do their best work if oxygenated water containing ammonia and nitrite, is flowing over and around them, they also do best under subdued lighting, or in the dark.


They can be totally submerged in boxes, compartments, in tall columns, or on trays that are under tank water flows, drips, or sprays. Anything holding bioballs, ceramic rings, or lava rock, bio-wheels (rotating biological contactors) , porous rock, sponges will all grow beneficial bacteria.







Old hair curlers, old toothbrushes, anything solid with enough space can be bio-media. Just as any solid surface including rocks, waterlogged wood, and the glass sides of the tank will grow the bacteria.


Old tank water is a poor source of beneficial bacteria, and almost useless to cycle your tank, these bacteria are not planktonic.





Speaking of cycling, it is the process of acquiring that population of ammonia and nitrite consuming bacteria.


Putting water in a tank, with gravel, turning on a filter, and letting the tank sit filter running a couple days, is “not” cycling.


To grow the amount of bacteria you need, to consume the ammonia you fish will produce, you must feed them.


Either by adding a sacrificial fish that may die from its own ammonia,…


or fish less cycling by adding pure ammonia until the population of bacteria is reached, this can take 6 to 8 weeks.


Some people add a shrimp from the market and let it rot, that process process produces the ammonia the bacteria need.


Then you test until ammonia amounts spikes and falls to 0, nitrite spikes and fall to 0, and nitrate shows up on your tests.





So how much bio-media do you need?





This depends on the amount of fish in your tank, its size and the size of the fish. If you overfeed, (sometimes what you feed), and how often you change water, and clean filters (bio-media can be suffocated if plugged with gunk).





A 100 gallon tank with two adult oscars, will need much more bio-media than a 100 gallon tank with 50 guppies, or 5 angel fish, because of the amount of waste produced by the larger fish.


And the visible waste is not the only factor here.


Every time a fish respirates invisible ammonia is being produced and passes out thru the gills.

At the moment, my bio-filtration is a combination of porous stone, bio-balls, Porett foam, and old sea shells.
It has two connected sumps (about 20 gallons each) the 180 gallon tank holds about 15 fish, most around 5", only one 8", the sumps (filtration also contain shrimp, higher plants, and algae) so may also be considered refugiums, pump is roughly 2400 GPH.fullsizeoutput_f12.jpeg
fullsizeoutput_1785.jpeg
fullsizeoutput_1b2c.jpeg
 
Last edited:
Love it but you need to fix the following statement

"or fishes cycling by adding pure ammonia until the population of bacteria is reached, this can take 6 to 8 weeks. "

I know you meant to write fish-less cycling.?
 
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There is a lot of talk about which bio-media is best.


There are also claims that one is much better than the rest.


But how would we know?


The goal of Bio-media is not to make a tank look aesthetically better, clearer, or cleaner.


Bio-media is in our tanks to support a population of bacteria that eat ammonia and nitrite. In reality basically bio-media, and its inhabitants, do nothing else. They don’t filter out particles or fish feces, that’s what mechanical media is for.


You can’t see ammonia or nitrite in the water.





The only way you will know that the population of beneficial bacteria is sufficient in your tank is if……





your fish aren’t dying,


they are healthy,


or if you use, one of the commercial tests for ammonia and/or nitrite that are available.





Clear looking, apparently clean, water can be toxic with ammonia, and turbid, brown muddy water can be healthy.


The most common tests are colorimetric chemical tests, and colorimetric comparator strips (or paper tests).


Depending on what chemical is used as a reagent (indicator) , ammonia will show up as a certain color (often times green)
View attachment 1392451

Whether one is better or worse tests is subjective.


If you use proper techniques of rinsing and measuring amounts in tubes, the liquid chem tests are great. (you are dealing with parts per million, a tiny stain on a tube, or few extra drops more or less can change everything.


If you don’t properly rinse tubes, or measure sloppily, or not abide by the proper timing and shaking, they can be inaccurate. If they are out of date, they may be inaccurate.


I rinse tubes 3 times in DI or RO water after each sample, and set them upside down to drain after use. A left over drip can leave a residual that can skew results.


Test strips are easy, you dip, wait the proper amount of minutes to read, and get a reading. They can be accurate, if well made.


If they are out of date, or compromised by dampness, they can give false results.


As a retired chemist in a water quality lab, I have found both can be accurate.





Most active ammonia and nitrite consuming bacteria are sessile, which means they live as a bio-film on objects, and do their best work if oxygenated water containing ammonia and nitrite, is flowing over and around them, they also do best under subdued lighting, or in the dark.


They can be totally submerged in boxes, compartments, in tall columns, or on trays that are under tank water flows, drips, or sprays. Anything holding bioballs, ceramic rings, or lava rock, bio-wheels (rotating biological contactors) , porous rock, sponges will all grow beneficial bacteria.







Old hair curlers, old toothbrushes, anything solid with enough space can be bio-media. Just as any solid surface including rocks, waterlogged wood, and the glass sides of the tank will grow the bacteria.


Old tank water is a poor source of beneficial bacteria, and almost useless to cycle your tank, these bacteria are not planktonic.





Speaking of cycling, it is the process of acquiring that population of ammonia and nitrite consuming bacteria.


Putting water in a tank, with gravel, turning on a filter, and letting the tank sit filter running a couple days, is “not” cycling.


To grow the amount of bacteria you need, to consume the ammonia you fish will produce, you must feed them.


Either by adding a sacrificial fish that may die from its own ammonia,…


or fishes cycling by adding pure ammonia until the population of bacteria is reached, this can take 6 to 8 weeks.


Some people add a shrimp from the market and let it rot, that process process produces the ammonia the bacteria need.


Then you test until ammonia amounts spikes and falls to 0, nitrite spikes and fall to 0, and nitrate shows up on your tests.





So how much bio-media do you need?





This depends on the amount of fish in your tank, its size and the size of the fish. If you overfeed, (sometimes what you feed), and how often you change water, and clean filters (bio-media can be suffocated if plugged with gunk).





A 100 gallon tank with two adult oscars, will need much more bio-media than a 100 gallon tank with 50 guppies, or 5 angel fish, because of the amount of waste produced by the larger fish.


And the visible waste is not the only factor here.


Every time a fish respirates invisible ammonia is being produced and passes out thru the gills.

At the moment, my bio-filtration is a combination of porous stone, bio-balls, Porett foam, and old sea shells.
It has two connected sumps (about 20 gallons each) the 180 gallon tank holds about 15 fish, most around 5", only one 8", the sumps (filtration also contain shrimp, higher plants, and algae) so may also be considered refugiums, pump is roughly 2400 GPH.View attachment 1392453
View attachment 1392452
View attachment 1392454


Thanks Duane this is well thought out and very easy to understand even to someone new. I personally would make this a Sticky thread.
 
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Love it but you need to fix the following statement

"or fishes cycling by adding pure ammonia until the population of bacteria is reached, this can take 6 to 8 weeks. "

I know you meant to write fish-less cycling.?
Thanks for pointing that out, it is why I meant, don't know if its me or spell check.
 
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This has helped me understand much about what I have been trying to learn thanks for posting duanes!

one question:
How do I catch floating debris with my filters like what media works best for catching big stuff (i believe this is what you meant by mechanical media?) and what works best as biomedia?
thanks again!
 
Mechanical media is the stuff in filters there to catch particulate (floating stuff) in the water, the pump pulls or pushes it out of the tank, and as it travels thru the filter, it gets trapped, it can be any inert woven object (within reason) that traps particles.
Mechanical media can be the woven pad in the hang on back filters, it can be a sponge, or a filter sock hung below the outfall of a line to the sump, it can be the woven fiberous mat in a sump or canister, or something as simple as a Scrubby pad.
This is the material that needs to be regularly squeezed or rinsed out, because the particulate it collects tends to rot, fouling the water if not removed.
A filter sock below, hanging on an outfall to a sump.
.
a woven mat (floss) and sponges in a sump
fullsizeoutput_1785.jpeg
A Scubbie At the top of a filter column, a cheap and easy to and clean out mechanical type

In many case mechanical media can also be thought of as being partial bio-media, because after a time, it becomes coated with beneficial bacteria, and if cleaned by simply rinsing in water change water, its biofilm will not be totally washed away in the cleaning process

And using only one type is not a hard and fast rule, you can use combinations of mechanical, and be very effective.
Some media will catch large particles, before they reach smaller pore media later on in the water column.
 
Man this is awesome info right here. I want to share I have a emporer 400 hob filter it came with the carbon catridges but I dont want to use carbon and see how clean I can keep my tank naturally using a combo of media like you are showing. Any ideas or expeirence with what I should use as media ina filter such as the emporer? Just dont want to do trial and error if I can just get some direction on stuff you already know will work to save time and money lol thanks again for the help and lessons I am beginning to see how this all works real cool and actually simple once you got it down I can see. In the picture of the mat filter what is all the white stuff is that stuff you gotta clean off after a while or is that part of the media?
 
Man this is awesome info right here. I want to share I have a emporer 400 hob filter it came with the carbon catridges but I dont want to use carbon and see how clean I can keep my tank naturally using a combo of media like you are showing. Any ideas or expeirence with what I should use as media ina filter such as the emporer? Just dont want to do trial and error if I can just get some direction on stuff you already know will work to save time and money lol thanks again for the help and lessons I am beginning to see how this all works real cool and actually simple once you got it down I can see. In the picture of the mat filter what is all the white stuff is that stuff you gotta clean off after a while or is that part of the media?

Marineland refillable cartridges

 
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I have two of those that came with my filter but what should I put inside them? also I will be using lava rock as well from what I have read. So would the lava rock be used as the biomedia and I guess these containers can house my mechanical media?
 
Lava rock would be considered bio-media, although the pores may trap some particulate, if they get too gunked up, it defeats the purpose, because too much gunk can prevent oxygen from getting to the beneficial biofilm, choking it off.
Carbon is mostly used as a chemical media to lessen odor. You can use it or not, in the cartridges.
The blue pads are mechanical filtration.
The bio-wheels are also considered bio-media.

The spray holes to the bio-wheels can be easily plugged with gunk, I always kept a screw nearby, to ream them out when the wheels started to slow up.
 
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