If I'm understanding your description correctly, I would make (cut) an acrylic strip the lenght of the "Long" side, about 1" x 1/2" thickness to make a cleat for a wider bonding surface. I would solvent glue (weld) this strip to the bottom giving your self a wider surface to solvent glue the side to. Afterwards, solvent glue the side to the bottom, Use wood clamps to hold the side to the bottom while it cures. As per the crack, I'd drill a small hole at the end of it so it terminates (doesn't run any further) fill the crack with (I can't remember the part #) weld-it solvent that is water like consistancy and take some solvent and acrylic shavings, "dust" and fill the small hole you drilled. If you ant to be extra safy, you could also solvent glue a small piece of acrylic over the crack (still drill a hole though)
Hope this made sence. I fixed an aquarium with damage much like you discribed this way. Another concern though, that seam should have not let go. I have found many tanks are actually stronger at the seams where they were glued together than the acrylic is. In other words, the panel often time will brake before the seamed, solvent glued joint will.
Joel