I would follow the instructions on the conditioner you are using.
I use Seachem Safe and the directions state:
"May be added to aquarium directly, but is better if added to new water first. If adding directly to aquarium, base dose on aquarium volume. If temperature is > 30 C (86 F) cut dosing in half."
I dose based on the volume of my tank and add water...I've been doing it this way for years without any problems.
Seachem Safe is the powdered version of Prime; it's pretty concentrated and will save you a lot of money over liquid water conditioners. IIRC, 1 KG treats 200,000 gallons and it only costs about $30. If you aren't using it I would look into it.
What are you keeping in the pond? Are you trying to maintain tropical temps?