It absolutely makes sense that when you create a habitat amenable to your shrimp, and provide appropriate food for them, that you will also get the occasional hanger-on or "groupie" joining the band. The ones you have described don't sound like shrimp killers. I've never had a problem caused by copepods or scuds; planaria might not be the ideal companion for baby shrimp, but they typically move across surfaces or substrates rather than swimming through open water. The best way to deal with them is to reduce the feeding and keep a cleaner tank.
Doing a "clean" transfer even of fish can be a challenge; doing the same with a colony of shrimp that includes large numbers of tiny shrimplets sounds like a nightmare. And if you painstakingly catch and transfer all those shrimplets, all it would take is for a very small number of uninvited guests to be incidentally caught and moved as well...and then all your work is wasted.
Personally, I think that the number of shrimplets damaged or killed or missed during this tedious process will far exceed the number that may be lost due to the actions of any of these interlopers.