In the wild there is heaps of variation in different species of fish. Green Texans, for example, has a large range of colors, pearling patterns, sizes and shapes, and even the body form are said to vary. Similarly with Bay Snooks, there's green and red ones. Heaps of people are interested in wild caught Paraneetroplus and wild caught Parachromis species as there's just so much variation in the wild. If a mutation results in a trait that isn't detrimental, it won't be selected against. If a trait is useful, it's selected for and different individuals have different traits in the wild. To say that there there is a 'standard profile' does not make sense in my opinion, because we include all traits a wild caught fish could have, then that's be a pretty huge profile - and in fact it won't be a 'standard' profile anymore. And as we get more wild caugh individuals, we get more variation. Recently a lot of wild caught JDs have a red coloration that is seen by few and far in between, but is getting more common. It is absolutely unknown how many more fish we're gonna catch with traits that we've never seen. So that makes a 'standard profile' a really un-useful option. On top of that, many traits found nowadays - bright coloration for example, are not often found in the wild as that attracts predators and gets selected against. Shall we kill off all these fish then, because they don't fit the drab profile of their wild caught counterpart.
We may view drab fish as low quality fish, but in the wild they'd be the survivors. On the topic of a 'gene pool', it is simply the collection of all genes (and their alleles) of all individuals of a designated group of organisms. You can't pollute it, you can't cloud it, you can't improve it, you can't better it because it is completely neutral. You can expand it by adding more genes (alleles) to it or contract it by removing genes (alleles) from it, but otherwise used correctly the term is only referring to the collection of alleles presented, nothing more, nothing less, simple as that.
If the fish is defective (maybe born with intestines poking out or something and getting infected), I'd agree to culling, but not if it's a simple variation in the body color or shape or size or pattern or stuff like that.
In-/line-selective breeding is man taking nature in its own hands. Meh even just keeping fish is taking it in out own hands. We decide the fate of the fish we keep, decide what lives and what dies, very well killing a predator just because it fed on our favourite fish.
If that's not taking nature in out own hands, I don't know what is.
In short, wild individuals exhibit a lot of variation anyways, and are not always what we refer to with a 'standard profile'. We mess aroun with nature so much anyways already, so can't really say breeding these fish with new traits is any different from anything else, in terms of playing with nature. Finally, the genepool simply refers to the sets of alleles present, nothing more nothing less. Imo shouldn't refer to with 'polluting' or 'clouding' or 'bettering' or the likes.
This is my two cents. I do hope that anyone reading this gets something out of it, but hey everyone has their own opinions.
Let's agree to disagree I guess.