You could make a bottom fed weir...
I assume you have a weir around your standpipe to the sump (if it isn't durso, why not?

). This will govern the height of the water in the tank. Around this put a second weir a small distance apart (so as not to restrict the flow) and have it higher at the top than the first weir.
Now, leave around an inch gap between the bottom of this weir and your substrate. This should force all the water in the tank to go down and then up, thus helping you suck all the stuff that otherwise deposits on the bottom to the top.
Simple, and easy, and, if you already have the one weir: you could fit this in front and just not worry about sealing it, it wouldn't let that much water around the sides and saves stripping the tank down.
It is also good practice to take a small corner or so off of the bottom fed weir to allow the weir to take a small portion of water from the top, thus preventing any scummy build up on the surface.
I can't think of a much better way of getting rid of the stuff than that, and, unlike most suggestions, it doesn't require any extra stuff in the tank.
Andy