I have found these overflows to be very inconsistent. I made one almost identical to your and it blows the big one. I would suggest to either try the powerhead idea or get an aqualifter.
As far as the position of the check valve. This suggestion might have been made base on the idea that there might be a spot on the inside that is trapping air. Moving it to one of the corners would be a higher point than in the middle. But, if your pulle water out of the U-tube via sution, it should matter too much.