Well if its not on the glass and rocks, then its prob not a algae. What if anything do you have in your tank. Decor, Substrate, etc..
WHat I found was: Although driftwood is often responsible for most tinted or tea-stained water. Other organics can also be responsible. Decaying plant matter and other debri can over time release tannins just like driftwood and cause the brownish tint.
By far, the best and simpliest thing you can do is daily 25% water changes. Changing a little bit more than 25% would provide results even faster. Vacume your substrate. (may take a few times to finally get all the tannins out of if. Another remedy you can try is adding activated carbon to your filter. The carbon will absorb discolorations and really helps clear brownish aquarium water.
But if it is Algae
Brown Algea is caused by three things:
- Excess silicates & nitrates
- Inadequate light
- Low oxygen levels
This is what I found as information on brown algae:
Brown algae is a common occurrence in a newly set up aquarium but can happen in est aquariums as well. It is generally caused by too little light, an excess of silicates, an abundance of nutrients, and too little oxygen. Silicates can build up through tap water that is high in silicic acid, and silicates that leech from some types of substrates.
Cure
- Wipe off surfaces & vacuum gravel well
- Use silicate adsorbing resin in the filter
- Increase the lighting
- Stock a plecostomus or several otocinclus
This type of algae does not adhere strongly to the tank surfaces, and is easily wiped away. Vacuuming the gravel with a siphon will quickly remove coatings from the substrate. Increasing the lighting will inhibit re-growth of brown algae. As a new tank matures brown algae is often eliminated naturally by plants and green algae competing for nutrients.
Some sucker-mouth catfish will readily eat brown algae, most notably plecostomus and otocinclus. If the problem is due to high silicates in the water, and the brown algae persists, a special silicate absorbing resin can be used in the filter.
Prevention
- Use of RO water
- Regular water changes
- Regular aquarium cleaning
- Good lighting
As with any algae, keeping the tank clean and performing regular water changes is one of the best preventative measures. Unfortunately it is still possible to get algae in spite of regular maintenance, especially in a newly established aquarium. Prompt attention to sudden algae growth will prevent more serious problems.